PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008224372.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 223aa    MW: 25417.9 Da    PI: 5.7966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008224372.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-0969116454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     a+  rE+ RR+r+N++f eL  +l +    + +K +K +iL  A++ + +L
  XP_008224372.1  69 AKACREKLRRERLNDRFVELSAVLEPG---RPPKSDKPAILDDAIRVLTQL 116
                     6778**********************8...89**************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.42465116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.43E-669121No hitNo description
PfamPF000109.2E-769116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.5E-871122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-1271139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-1071138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MYSLMEEWIE YLDYIEETNQ PSDFLWPNDT PSFREFEFSA VDVPAAFSPE KECPRKRGRT  60
DSSCSGSGAK ACREKLRRER LNDRFVELSA VLEPGRPPKS DKPAILDDAI RVLTQLRAEA  120
QELKETNEKL LEEVKSLKAE KNELREEKLV LKADKERLEK QLKGMAISPS GFVPTHPAVP  180
AAYHPGASKM AMYPSYSLVP MWHYLPPSVR DTSRDHELRP PAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15359PRKRGRT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224372.11e-163PREDICTED: transcription factor bHLH104
SwissprotQ8L4676e-82BH104_ARATH; Transcription factor bHLH104
TrEMBLM5XEQ11e-157M5XEQ1_PRUPE; Uncharacterized protein
STRINGGLYMA10G01010.11e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81792537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.23e-73bHLH family protein